STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3154ABC nitrate/sulfonate/bicarbonate transporter family, ATPase subunit; IMG reference gene:2512956663; PFAM: ABC transporter; truncated by 18 aa. (258 aa)    
Predicted Functional Partners:
RSP_3153
ABC nitrate/sulfonate/bicarbonate transporter family, inner membrane subunit; IMG reference gene:2512956662; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.997
RSP_3151
ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; IMG reference gene:2512956660; PFAM: NMT1/THI5 like.
 
 
 0.991
RSP_3152
ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; IMG reference gene:2512956661; PFAM: NMT1/THI5 like.
 
 
 0.991
RSP_2598
ABC transporter, inner membrane subunit; IMG reference gene:2512954541; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.881
DppD
IMG reference gene:2512955833; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region.
 
 
   
0.872
RSP_3166
ABC transporter, inner membrane subunit; IMG reference gene:2512956676; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.840
RSP_0644
ABC transporter, inner membrane subunit; IMG reference gene:2512955663; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.734
RSP_0942
ABC transporter, inner membrane subunit; IMG reference gene:2512955977; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.676
RSP_0180
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; IMG reference gene:2512955177; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.646
RSP_3155
IMG reference gene:2512956664; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
    0.618
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.