Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Score
RSP_3208Putative CbiL protein; IMG reference gene:2512956721. (197 aa)    
Predicted Functional Partners:
RSP_3207
Putative cobalamin biosynthesis protein CbiM; IMG reference gene:2512956720; PFAM: Cobalt uptake substrate-specific transmembrane region.
 
    0.972
cbiQ
ABC cobalt transporter, inner membrane subunit, CbiQ; IMG reference gene:2512956722; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
 
    0.960
RSP_6168
ABC Cobalt transporter, periplasmic binding protein CbiN; IMG reference gene:2512956719; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.957
cbiO
ABC cobalt transporter, ATPase subunit, CbiO; IMG reference gene:2512956723; PFAM: ABC transporter.
 
    0.950
ArsH
Arsenical resistance protein, ArsH; IMG reference gene:2512954677; PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH.
   
  
 0.864
RSP_3433
Transcriptionalregulator, CopG family; IMG reference gene:2512956944; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR.
 
     0.585
trpA
Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
      
 0.559
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.534
RSP_3488
Hypothetical protein; IMG reference gene:2512956998; PFAM: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; truncated by 6 aa.
  
    0.462
RSP_0463
IMG reference gene:2512955474; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
   
    0.458
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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