STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3255ABC peptide transporter, periplasmic binding protein; IMG reference gene:2512956761; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (540 aa)    
Predicted Functional Partners:
RSP_3257
ABC peptide transporter, inner membrane subunit; IMG reference gene:2512956762; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.996
RSP_3258
ABC peptide transporter, inner membrane subunit; IMG reference gene:2512956763; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.995
RSP_3250
ABC peptide transporter, inner membrane subunit; IMG reference gene:2512956757; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.984
RSP_3252
IMG reference gene:2512956759; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
 
 0.983
RSP_3251
ABC peptide transporter, inner membrane subunit; IMG reference gene:2512956758; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.980
RSP_3253
IMG reference gene:2512956760; PFAM: Acetamidase/Formamidase family.
 
    0.960
RSP_3248
ABC peptide transporter, periplasmic binding protein; IMG reference gene:2512956755; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
 
0.953
RSP_3249
IMG reference gene:2512956756; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
  
 
 0.945
RSP_3259
Transcription antitermination protein; IMG reference gene:2512956764; PFAM: ANTAR domain.
 
     0.932
amiC-2
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; IMG reference gene:2512956765.
 
  
 0.926
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.