STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpECarbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (287 aa)    
Predicted Functional Partners:
ugpA
Carbohydrate ABC transporter membrane protein 1, CUT1 family; IMG reference gene:2512956794; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.999
ugpB
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; IMG reference gene:2512956795; PFAM: Bacterial extracellular solute-binding protein.
 
 0.996
upgC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 0.995
RSP_1443
Carbohydrate ABC transporter membrane protein 1, CUT1 family; IMG reference gene:2512953334; PFAM: Binding-protein-dependent transport system inner membrane component; truncated by 7 aa.
 
 0.902
RSP_3677
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2512957211; PFAM: ABC transporter; TOBE domain.
 
 0.884
RSP_3673
Carbohydrate ABC transporter membrane protein 1, CUT1 family; IMG reference gene:2512957207; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.878
smoK
Mannitol ABC transporter ATP-binding protein;sorbitol ABC transporter ATP-binding protein; IMG reference gene:2512955084; PFAM: ABC transporter; TOBE domain.
 0.871
RSP_1445
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2512953336; PFAM: ABC transporter; TOBE domain.
 
 0.856
aglK
Alpha-glucoside transport system ATP-binding protein; IMG reference gene:2512954832; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.826
aglF
IMG reference gene:2512954834; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.758
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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