STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3336ABC spermidine/putrescine transporter, inner membrane subunit; IMG reference gene:2512956845; PFAM: Binding-protein-dependent transport system inner membrane component. (287 aa)    
Predicted Functional Partners:
RSP_3335
ABC spermidine/putrescine transporter, inner membrane subunit; IMG reference gene:2512956844; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.996
RSP_3337
ABC spermidine/putrescine transporter, periplasmic binding protein; IMG reference gene:2512956846; PFAM: TAT (twin-arginine translocation) pathway signal sequence.
 
 
 0.991
RSP_3338
ABC spermidine/putrescine transporter, ATPase subunit; IMG reference gene:2512956847; PFAM: ABC transporter; TOBE domain.
 0.991
RSP_3393
ABC opine/polyamine transporter, inner membrane subunit; IMG reference gene:2512956904; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.941
RSP_3334
HyuE hydantoin racemase; IMG reference gene:2512956843; PFAM: Asp/Glu/Hydantoin racemase; extended by 13 aa.
 
    0.924
RSP_3038
ABC permidine/putrescine transporter, inner membrane subunit; IMG reference gene:2512956537; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.895
RSP_3518
ABC polyamine/opine transporter, inner membrane subunit; IMG reference gene:2512957031; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.879
RSP_2398
ABC putrescine transporter, inner membrane subunit; IMG reference gene:2512954342; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.859
RSP_3040
ABC permidine/putrescine transporter, periplasmic substrate-binding protein; IMG reference gene:2512956539; PFAM: Bacterial extracellular solute-binding protein.
  
 0.823
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
      
 0.813
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.