STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3344PAS sensor diguanylate cyclase; IMG reference gene:2512956853; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (490 aa)    
Predicted Functional Partners:
RSP_0329
Diguanylate cyclase with GAF sensor; IMG reference gene:2512955339; PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 0.707
RSP_1063
Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512956104; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.696
RSP_1327
Putative flagellar basal body rod protein; IMG reference gene:2512956373; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins.
   
   0.680
RSP_0335
Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512955345; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
0.658
RSP_0030
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); IMG reference gene:2512955013; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
0.623
RSP_3402
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); IMG reference gene:2512956912; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; truncated by 3 aa.
 
 
0.616
RSP_3724
Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512957259; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
    0.614
RSP_0085
Multisensor hybrid histidine kinase; IMG reference gene:2512955075; PFAM: Response regulator receiver domain; His Kinase A (phospho-acceptor) domain; PAS fold; Hpt domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; truncated by 19 aa.
 
 
 0.599
RSP_1306
PAS sensor Signal Tranduction Histidine Kinase; IMG reference gene:2512956353; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.593
dorS
IMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
 
 
 0.576
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.