STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3380SH3 type 3 domain protein; IMG reference gene:2512956891; PFAM: Protein of unknown function (DUF1236); Bacterial SH3 domain. (221 aa)    
Predicted Functional Partners:
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.808
RSP_1933
Outer membrane protein, OmpA/MotB family; IMG reference gene:2512953847; PFAM: OmpA family.
  
    0.709
RSP_6097
Hypothetical protein; IMG reference gene:2512955139.
  
     0.554
RSP_2496
Cell Wall Hydrolase; IMG reference gene:2512954442; PFAM: Cell Wall Hydrolase.
  
     0.427
RSP_3378
Hypothetical protein; IMG reference gene:2512956889.
       0.427
RSP_3379
RES domain-containing protein; IMG reference gene:2512956890; PFAM: RES domain.
       0.427
RSP_1894
Cell Wall Hydrolase; IMG reference gene:2512953803; PFAM: Cell Wall Hydrolase; extended by 40.
  
     0.409
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.