STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3459Amino acid ABC transporter membrane protein 1, PAAT family; IMG reference gene:2512956970; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. (226 aa)    
Predicted Functional Partners:
RSP_3457
Amino acid ABC transporter substrate-binding protein, PAAT family; IMG reference gene:2512956968; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 0.993
RSP_3458
Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2512956969; PFAM: ABC transporter.
 
 0.987
RSP_3460
Amino acid ABC transporter membrane protein 2, PAAT family; IMG reference gene:2512956971; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
  
 
0.979
RSP_3745
Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2512957277; PFAM: ABC transporter.
 
 0.945
bztD
General L-amino acid transport system ATP-binding protein; IMG reference gene:2512953654; PFAM: ABC transporter.
 
 0.944
RSP_0371
Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2512955381; PFAM: ABC transporter.
 
 0.943
RSP_3742
Amino acid ABC transporter substrate-binding protein, PAAT family; IMG reference gene:2512957274; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 0.942
bztB
General L-amino acid transport system permease protein; IMG reference gene:2512953652; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 
 0.897
RSP_0372
Amino acid ABC transporter substrate-binding protein, PAAT family; IMG reference gene:2512955382; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 
 0.859
RSP_3461
N-carbamyl-D-amino acid amidohydrolase; IMG reference gene:2512956972; PFAM: Carbon-nitrogen hydrolase.
 
    0.778
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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