STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3470Hypothetical protein; IMG reference gene:2512956981. (259 aa)    
Predicted Functional Partners:
RSP_3466
Hypothetical protein; IMG reference gene:2512956977; TIGRFAM: conserved hypothetical protein.
  
    0.781
RSP_3468
3-oxoacyl-(acyl carrier protein) synthase; IMG reference gene:2512956979.
  
    0.780
RSP_3469
Hypothetical protein; IMG reference gene:2512956980.
  
    0.779
RSP_3467
Hypothetical protein; IMG reference gene:2512956978; PFAM: Uncharacterized protein conserved in bacteria (DUF2169).
  
    0.777
RSP_3471
Hypothetical protein; IMG reference gene:2512956982.
  
    0.745
RSP_3616
Transcriptional regulator, Crp-Fnr family; IMG reference gene:2512957144; PFAM: Cyclic nucleotide-binding domain.
   
    0.457
RSP_3462
Dihydropyrimidinase; IMG reference gene:2512956973; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase.
  
    0.409
RSP_3463
Putative hydantoin racemase; IMG reference gene:2512956974; PFAM: Asp/Glu/Hydantoin racemase.
  
    0.400
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.