Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSP_3530Oxidoreductase; IMG reference gene:2512957042; PFAM: FAD dependent oxidoreductase. (531 aa)    
Predicted Functional Partners:
fbcC
Cytochrome c1 precursor; IMG reference gene:2512956440; PFAM: Cytochrome C1 family.
      
 0.839
bchZ
Putative chlorophyllide reductase, BchZ subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole; Belongs to the ChlB/BchB/BchZ family.
     
 0.824
bchX
Chlorophyllide reductase, BchX subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole.
  
  
 0.812
cycA
Cytochrome c2; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.
      
 0.810
RSP_3529
Putative TIM-barrel fold metal-dependent hydrolase; IMG reference gene:2512957041; PFAM: Amidohydrolase.
  
    0.786
RSP_3532
AMP-binding enzyme; IMG reference gene:2512957043; PFAM: AMP-binding enzyme.
  
    0.773
bchY
Chlorophyllide reductase, BchY subunit; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole.
     
 0.711
crtB
Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield phytoene (By similarity). Belongs to the phytoene/squalene synthase family.
 
  
 0.649
RSP_3533
IMG reference gene:2512957044; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.598
RSP_3528
Transcriptional regulator, TetR family; IMG reference gene:2512957040; PFAM: Bacterial regulatory proteins, tetR family.
     
 0.567
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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