STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3635IMG reference gene:2512957170; PFAM: D12 class N6 adenine-specific DNA methyltransferase. (268 aa)    
Predicted Functional Partners:
RSP_3636
Hypothetical protein; IMG reference gene:2512957171.
  
    0.629
RSP_3637
Hypothetical protein; IMG reference gene:2512957172.
  
    0.586
RSP_3634
Hypothetical protein; IMG reference gene:2512957169; PFAM: Protein of unknown function (DUF497); truncated by 6 aa.
       0.473
RSP_6195
Hypothetical protein; IMG reference gene:2512957168.
       0.473
RSP_2672
Hypothetical protein; IMG reference gene:2512954616.
   
    0.457
gpD
Phage tail protein D; IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD).
 
    0.430
gpU
Putative phage tail protein U; IMG reference gene:2512956866; PFAM: Phage P2 GpU; extended by 10 aa.
 
    0.405
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.