STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3686Transcriptional regulator, LacI family; IMG reference gene:2512957222; PFAM: Bacterial regulatory proteins, lacI family; family. (346 aa)    
Predicted Functional Partners:
fruB
Multi-component fructose specific PTS system protein, (PtsI, Hpr, and IIA domains); IMG reference gene:2512953693; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family.
 
 
 0.944
RSP_3687
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; IMG reference gene:2512957223; PFAM: family.
 
  
 0.883
gltB
Glutamine-pyruvate aminotransferase; IMG reference gene:2512956189; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
 
 0.878
yphD
Monosaccharide ABC transporter membrane protein, CUT2 family; IMG reference gene:2512957225; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.864
RSP_3688
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; IMG reference gene:2512957224; PFAM: ABC transporter.
 
  
 0.849
RSP_3690
Resiniferatoxin-binding, phosphotriesterase-related protein; IMG reference gene:2512957226; PFAM: Phosphotriesterase family.
       0.773
RSP_3691
Putative cytoplasmic protein; IMG reference gene:2512957227; PFAM: Protein of unknown function (DUF1355).
 
    0.747
RSP_1686
Putative Phosphocarrier HPr protein; IMG reference gene:2512953590; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.629
RSP_2968
Dihydrolipoamide dehydrogenase; IMG reference gene:2512954934; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase.
    
 
 0.599
sopT
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
   0.593
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.