STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3693BtpA protein; IMG reference gene:2512957229; PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family. (280 aa)    
Predicted Functional Partners:
RSP_3694
Putative transcription activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family.
    0.979
RSP_3690
Resiniferatoxin-binding, phosphotriesterase-related protein; IMG reference gene:2512957226; PFAM: Phosphotriesterase family.
 
    0.801
RSP_3691
Putative cytoplasmic protein; IMG reference gene:2512957227; PFAM: Protein of unknown function (DUF1355).
 
    0.800
rbsK-2
Carbohydrate kinase, PfkB/Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
    0.708
RSP_3039
ABC permidine/putrescine transporter, inner membrane subunit; IMG reference gene:2512956538; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.614
RSP_3687
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; IMG reference gene:2512957223; PFAM: family.
 
     0.540
RSP_0201
ABC transporter, fused inner membrane subunits; IMG reference gene:2512955197; PFAM: Binding-protein-dependent transport system inner membrane component.
   
    0.457
RSP_2676
Putative periplasmic or secreted lipoprotein; IMG reference gene:2512954620; PFAM: Putative phospholipid-binding domain.
  
     0.419
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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