STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3785Putative bacteriophage-related protein; IMG reference gene:2512957309. (340 aa)    
Predicted Functional Partners:
RSP_3783
IMG reference gene:2512957312; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
 
    0.874
RSP_3784
IMG reference gene:2512957311; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
 
     0.858
RSP_3627
IMG reference gene:2512957161; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type.
 
    0.786
RSP_3786
Hypothetical protein; IMG reference gene:2512957308.
  
    0.781
RSP_6200
Hypothetical protein; IMG reference gene:2512957307.
       0.768
RSP_3781
IMG reference gene:2512957314; PFAM: Phage terminase large subunit (GpA).
 
    0.760
RSP_2994
Hypothetical protein; IMG reference gene:2512954962.
 
    0.691
RSP_6201
Hypothetical protein; IMG reference gene:2512957310.
       0.676
RSP_1647
Putative peptidase; IMG reference gene:2512953547; PFAM: Peptidase family S49.
 
    0.591
RSP_3650
Periplasmic serine protease (ClpP class); IMG reference gene:2512957186; PFAM: Peptidase family S49.
 
    0.564
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.