STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_3811Hypothetical protein; IMG reference gene:2512956470. (107 aa)    
Predicted Functional Partners:
RSP_3757
Hypothetical protein; IMG reference gene:2512957289.
  
    0.861
RSP_2718
Putative outer membrane protein; IMG reference gene:2512954663.
   
    0.755
RSP_2065
IMG reference gene:2512953979; PFAM: Bacteriophage protein of unknown function (DUF646).
   
    0.623
RSP_1821
Molybdopterin-containing oxidoreductase, putative formate dehydrogenase; IMG reference gene:2512953729; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
    0.614
RSP_3809
IMG reference gene:2512956468; PFAM: Plasmid stabilisation system protein.
       0.612
RSP_3810
Hypothetical protein; IMG reference gene:2512956469; TIGRFAM: putative addiction module antidote protein, CC2985 family.
       0.574
parB
ParB-like nuclease; IMG reference gene:2512956472; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins.
  
    0.489
RSP_3814
Putative transcriptional regulator; IMG reference gene:2512956473; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein.
  
    0.481
RSP_3427
Animal heme peroxidase; IMG reference gene:2512956938; PFAM: Animal haem peroxidase.
   
    0.457
RSP_3812
Recombinase; IMG reference gene:2512956471; PFAM: Recombinase; Resolvase, N terminal domain.
  
    0.426
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.