STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parBParB-like nuclease; IMG reference gene:2512956472; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins. (302 aa)    
Predicted Functional Partners:
RSP_3814
Putative transcriptional regulator; IMG reference gene:2512956473; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein.
    0.979
RSP_3812
Recombinase; IMG reference gene:2512956471; PFAM: Recombinase; Resolvase, N terminal domain.
 
    0.954
ftsZ1
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.775
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
  
  
 0.722
RSP_1423
ParA family ATPase; IMG reference gene:2512957358; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.679
RSP_1042
ATPase involved in chromosome partitioning; IMG reference gene:2512956082; PFAM: ATPase MipZ.
  
 
 0.658
slp
Slp; IMG reference gene:2512955034; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.633
parA
Chromosome segregation ATPase; IMG reference gene:2512956271; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.630
clpX
ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
      
 0.616
gidB
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.594
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.