STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6016Hypoxia-induced family protein; IMG reference gene:2512953597; PFAM: Hypoxia induced protein conserved region. (69 aa)    
Predicted Functional Partners:
pduO
IMG reference gene:2512953596; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.848
RSP_1694
Putative short-chain dehydrogenase/reductase; IMG reference gene:2512953598; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.641
etfA
IMG reference gene:2512953594; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
       0.634
etfB
IMG reference gene:2512953595; PFAM: Electron transfer flavoprotein domain.
       0.633
RSP_0381
Hypothetical protein; IMG reference gene:2512955391.
  
     0.608
RSP_1876
Integral membrane protein; IMG reference gene:2512953786; PFAM: Integral membrane protein (DUF2244).
  
     0.608
RSP_6229
Hypothetical protein; IMG reference gene:2512955825.
  
     0.608
RSP_1857
Hypothetical protein; IMG reference gene:2512953766.
  
     0.584
RSP_1900
Flp pilus assembly protein, protease CpaA; IMG reference gene:2512953809; PFAM: Type IV leader peptidase family.
  
     0.549
RSP_2849
Putative membrane protein; IMG reference gene:2512954755.
  
     0.519
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.