STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6027Hypothetical protein; IMG reference gene:2512953891. (109 aa)    
Predicted Functional Partners:
cobS
Cobaltochelatase CobS subunit; IMG reference gene:2512953893; PFAM: AAA domain (dynein-related subfamily); Cobaltochelatase CobS subunit N terminal; TIGRFAM: cobaltochelatase, CobS subunit; truncated by 20 aa.
       0.773
RSP_6028
Hypothetical protein; IMG reference gene:2512953892.
       0.773
RSP_1975
IMG reference gene:2512953889; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
       0.615
cobT
Cobaltochelatase CobT subunit; IMG reference gene:2512953890; PFAM: Cobalamin biosynthesis protein CobT VWA domain; Cobalamin biosynthesis protein CobT; TIGRFAM: cobaltochelatase, CobT subunit.
       0.615
RSP_1978
Molecular chaperone, DnaJ family; IMG reference gene:2512953894; PFAM: DnaJ domain.
       0.520
RSP_1974
Hypothetical protein; IMG reference gene:2512953888; PFAM: Domain of unknown function (DUF427).
       0.480
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.