STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6032Putative TolA; IMG reference gene:2512953982. (144 aa)    
Predicted Functional Partners:
RSP_2062
Hypothetical protein; IMG reference gene:2512953976.
       0.773
RSP_2063
Hypothetical protein; IMG reference gene:2512953977.
       0.773
RSP_2064
IMG reference gene:2512953978; PFAM: Protein of unknown function (DUF3168).
       0.773
RSP_2065
IMG reference gene:2512953979; PFAM: Bacteriophage protein of unknown function (DUF646).
       0.773
RSP_2066
Phage head-tail adaptor, putative, SPP1 family; IMG reference gene:2512953980; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family.
       0.773
RSP_6031
Hypothetical protein; IMG reference gene:2512953981.
       0.773
RSP_2067
IMG reference gene:2512953983; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
       0.574
RSP_2061
Hypothetical protein; IMG reference gene:2512953975; extended by 20 aa; non-canonical start codon.
       0.566
RSP_2068
Putative ClpP-like protease; IMG reference gene:2512953984; PFAM: Clp protease; Belongs to the peptidase S14 family.
       0.562
RSP_2069
Putative phage portal protein, HK97 family; IMG reference gene:2512953985; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
       0.562
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.