STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6037IMG reference gene:2512954017; PFAM: Domain of unknown function (DUF1127). (71 aa)    
Predicted Functional Partners:
RSP_0774
RNA binding protein; IMG reference gene:2512955801; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.
      
 0.811
RSP_0861
Putative transmembrane hypothetical protein; IMG reference gene:2512955892.
  
     0.687
RSP_0557
Putative conserved small protein; IMG reference gene:2512955571; PFAM: Domain of unknown function (DUF1127).
      
 0.673
flhR
Two component transcriptional regulator, LuxR family; IMG reference gene:2512954534; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
      
 0.643
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
      
 0.614
RSP_6082
Hypothetical protein; IMG reference gene:2512954925.
      
 0.610
RSP_6127
Hypothetical protein; IMG reference gene:2512955764.
  
     0.605
RSP_0354
Hypothetical protein; IMG reference gene:2512955364.
  
     0.592
RSP_1009
IMG reference gene:2512956047; PFAM: Putative phospholipid-binding domain; OmpA family.
  
     0.585
RSP_0847
Two component transcriptional regulator, winged helix family; IMG reference gene:2512955876; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
      
 0.581
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.