STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6046Phage head-tail adaptor, putative, SPP1 family; IMG reference gene:2512954292; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family. (104 aa)    
Predicted Functional Partners:
RSP_7522
Hypothetical protein; IMG reference gene:2512954295; new gene.
  
   0.865
RSP_2353
Phage terminase, small subunit, putative, P27 family; IMG reference gene:2512954291; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family.
       0.811
RSP_2354
Phage protein, HK97 gp10 family; IMG reference gene:2512954294; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family.
       0.811
RSP_2352
Putative terminase large subunit / phage terminase; IMG reference gene:2512954290; PFAM: Phage Terminase; extended by 26 aa.
       0.797
RSP_6047
Hypothetical protein; IMG reference gene:2512954293.
       0.778
RSP_2351
Hypothetical protein; IMG reference gene:2512954289; TIGRFAM: phage tail tape measure protein, lambda family.
       0.761
RSP_2472
IMG reference gene:2512954414; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
  
   0.643
RSP_6054
Hypothetical protein; IMG reference gene:2512954416.
   
   0.631
RSP_2476
TIGR02217 family protein; IMG reference gene:2512954420; PFAM: Conserved hypothetical protein 2217 (DUF2460); TIGRFAM: TIGR02217 family protein.
   
 
 0.576
RSP_2477
IMG reference gene:2512954421; PFAM: Phage conserved hypothetical protein BR0599; Uncharacterized conserved protein (DUF2163); TIGRFAM: phage conserved hypothetical protein BR0599.
   
 
 0.576
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.