STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6096Transcriptional regulator, LuxR family; IMG reference gene:2512955112; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain. (219 aa)    
Predicted Functional Partners:
RSP_1741
Putative LuxR family protein; IMG reference gene:2512953645; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain.
 
0.930
RSP_3665
Transcriptional regulator, LuxR family; IMG reference gene:2512957201; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain.
  
 0.919
cerI
Autoinducer synthesis protein; IMG reference gene:2512955115; PFAM: Autoinducer synthetase.
  
  
 0.808
RSP_6127
Hypothetical protein; IMG reference gene:2512955764.
  
     0.696
RSP_0432
Yip1 domain-containing protein; IMG reference gene:2512955446; PFAM: Yip1 domain.
  
     0.661
RSP_6095
Putative transcriptional activator; IMG reference gene:2512955111; PFAM: Autoinducer binding domain.
 
    
0.653
RSP_0683
Hypothetical protein; IMG reference gene:2512955704.
  
     0.638
cerR
Transcriptional regulator, LuxR family; IMG reference gene:2512955113; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain.
  
 
 0.606
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
     0.587
RSP_0870
Hypothetical protein; IMG reference gene:2512955903.
  
     0.561
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.