STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6116Phasin protein; IMG reference gene:2512955482; PFAM: Phasin protein. (110 aa)    
Predicted Functional Partners:
RSP_1949
FeS assembly SUF system protein; IMG reference gene:2512953862; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
      
 0.582
rdxB
Iron-sulfur cluster-binding protein; Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen.
      
 0.580
RSP_0470
Hypothetical protein; IMG reference gene:2512955481.
       0.523
RSP_0472
Metal-dependent hydrolase; IMG reference gene:2512955483; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.519
RSP_0473
phospholipase-D family protein; IMG reference gene:2512955484.
       0.519
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.