STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpFIIIMG reference gene:2512956862; PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family. (165 aa)    
Predicted Functional Partners:
gpU
Putative phage tail protein U; IMG reference gene:2512956866; PFAM: Phage P2 GpU; extended by 10 aa.
 
   0.996
gpD
Phage tail protein D; IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD).
 
  
 0.992
RSP_2757
Hypothetical protein; IMG reference gene:2512954704.
  
 
 0.981
gpX
IMG reference gene:2512956867; PFAM: Phage Tail Protein X.
  
   0.979
RSP_6201
Hypothetical protein; IMG reference gene:2512957310.
  
 
 0.964
RSP_2761
IMG reference gene:2512954708; PFAM: Phage Tail Protein X.
  
   0.943
RSP_3781
IMG reference gene:2512957314; PFAM: Phage terminase large subunit (GpA).
 
  
 0.917
RSP_3355
IMG reference gene:2512956865; TIGRFAM: tape measure domain.
 
  
 0.896
RSP_3353
IMG reference gene:2512956863; PFAM: Phage tail protein E.
  
    0.856
RSP_7601
IMG reference gene:2512956864; PFAM: Phage P2 GpE; new gene.
       0.654
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.