STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6232Hypothetical protein; IMG reference gene:2512956477. (298 aa)    
Predicted Functional Partners:
RSP_2327
Hypothetical protein; IMG reference gene:2512954261.
  
     0.692
RSP_1987
Putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; IMG reference gene:2512953903; PFAM: Transglycosylase SLT domain.
  
     0.669
RSP_2955
Hypothetical protein; IMG reference gene:2512954920.
  
     0.662
RSP_6009
Hypothetical protein; IMG reference gene:2512953497.
  
     0.647
RSP_6204
Outer membrane protein; IMG reference gene:2512954657; PFAM: Outer membrane protein (OmpH-like).
  
     0.632
RSP_0414
Putative integral membrane protein; IMG reference gene:2512955427.
  
     0.577
rpmA
LSU ribosomal protein L27P; IMG reference gene:2512956479; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.572
RSP_1809
Putative membrane protein; IMG reference gene:2512953716; PFAM: Rhomboid family; extended by 114 aa; old pseudo, frameshift corrected.
  
     0.553
RSP_6052
Hypothetical protein; IMG reference gene:2512954373.
  
     0.545
RSP_2640
Putative membrane protein/domain protein; IMG reference gene:2512954583; PFAM: RDD family.
  
     0.537
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.