STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_6246Bacteriophage head-tail adaptor; IMG reference gene:2512954969; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family. (105 aa)    
Predicted Functional Partners:
RSP_6244
IMG reference gene:2512954967; PFAM: Protein of unknown function (DUF3168); different sequence near 5' due to sequence change.
       0.773
RSP_6245
Phage protein, HK97 gp10 family; IMG reference gene:2512954968; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family; extended by 14 aa on 3' end due to sequence change.
       0.773
RSP_6247
Phage-related protein, putative DNA packing; IMG reference gene:2512954970; PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging).
       0.773
RSP_2995
IMG reference gene:2512954971; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
       0.705
RSP_7540
IMG reference gene:2512954966; PFAM: Phage major tail protein 2; new gene.
       0.588
RSP_2996
Prohead peptidase; IMG reference gene:2512954972; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
       0.524
RSP_2997
Putative head portal protein; IMG reference gene:2512954973; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
       0.524
RSP_2998
Phage terminase-like protein, large subunit; IMG reference gene:2512954974; PFAM: Phage Terminase.
       0.447
RSP_2999
Hypothetical protein; IMG reference gene:2512954975.
       0.447
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.