STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_7601IMG reference gene:2512956864; PFAM: Phage P2 GpE; new gene. (42 aa)    
Predicted Functional Partners:
RSP_3355
IMG reference gene:2512956865; TIGRFAM: tape measure domain.
       0.762
gpU
Putative phage tail protein U; IMG reference gene:2512956866; PFAM: Phage P2 GpU; extended by 10 aa.
       0.762
gpX
IMG reference gene:2512956867; PFAM: Phage Tail Protein X.
       0.762
gpD
Phage tail protein D; IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD).
       0.762
RSP_3353
IMG reference gene:2512956863; PFAM: Phage tail protein E.
       0.686
gpFII
IMG reference gene:2512956862; PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family.
       0.654
RSP_3360
IMG reference gene:2512956869; PFAM: D12 class N6 adenine-specific DNA methyltransferase; extended by 13 aa.
       0.474
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.