STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eiF6Translation initiation factor 6 (eiF 6) (eiF6); Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. Inhibits translation of both leadered and leaderless mRNAs, maybe by binding to the 50S ribosome subunit, preventing it from binding to the 30S subunit; Belongs to the eIF-6 family. (223 aa)    
Predicted Functional Partners:
rplX
LSU ribosomal protein LX (rplX); Translation, Ribosomal Proteins.
  
 
 0.999
rpl31E
LSU ribosomal protein L31E (rpl31E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL31 family.
  
 
 0.999
rpl30E
LSU ribosomal protein L30E (rpl30E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL30 family.
  
 
 0.998
rpl10E
LSU ribosomal protein L10E (rpl10E); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.998
rpl14AB
LSU ribosomal protein L14AB (rpl14AB); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
 
 
 0.998
rpl3AB
LSU ribosomal protein L3AB (rpl3AB); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
 
 
 0.998
rpl19E
LSU ribosomal protein L19E (rpl19E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
 0.996
rpl24AB
LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
 0.996
rpl15E
LSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family.
 
   0.996
rpl21E
LSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family.
 
   0.994
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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