STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO0479Conserved hypothetical protein. (182 aa)    
Predicted Functional Partners:
rps5AB
SSU ribosomal protein S5AB (rps5AB); With S4 and S12 plays an important role in translational accuracy.
    
 0.714
SSO0478
Hits to probable TLDD proteins.
       0.664
rps24E
SSU ribosomal protein S24E (rps24E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS24 family.
  
  0.639
crtB
Phytoene synthetase (crtB); Cofactor Biosynthesis, Caretenoid Biosynthesis.
   
 0.634
rps6E
SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins.
  
  0.620
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.620
rps4E
SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.602
rpS13E
SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins.
  
  0.580
rps17AB
SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
  0.575
rpS12AB
SSU ribosomal protein S12AB (rpS12AB); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
  
  0.572
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.