Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
galE-2-2UDP-glucose 4-epimerase (galE-2); Energy Metabolism, Sugar metabolism. (310 aa)    
Predicted Functional Partners:
ugd
UDP-glucose 6-dehydrogenase (ugd); Central Intermediary Metabolism.
 
 0.991
rps19AB
SSU ribosomal protein S19AB (rps19AB); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.896
rps3AE
SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.894
rps3AB
SSU ribosomal protein S3AB (rps3AB); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.893
rps28E
SSU ribosomal protein S28E (rps28E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS28 family.
   
 0.883
rps17AB
SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
 0.880
rps24E
SSU ribosomal protein S24E (rps24E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.879
rpS13E
SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins.
 
 0.876
rpS12AB
SSU ribosomal protein S12AB (rpS12AB); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
 0.875
rps14AB
SSU ribosomal protein S14AB (rps14AB); Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.875
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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