STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argE-2Acetylornithine deacetylase (argE-2); Amino Acid Biosynthesis. (376 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase (dapE); Amino Acid Biosynthesis.
  
  
 
0.916
SSO1004
Conserved hypothetical protein.
   
 
 0.812
SSO1005
Conserved hypothetical protein.
 
     0.807
lysK
Conserved hypothetical protein; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine.
  
     0.676
argC
N-acetyl-gamma-glutamyl-phosphate reductase (argC); Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.
  
 
 0.586
argG
Argininosuccinate synthetase (argG); Amino Acid Biosynthesis, Glutamate; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.548
SSO0954
Conserved hypothetical protein.
  
    0.530
SSO1008
Conserved hypothetical protein.
       0.528
moaE
Cofactor Biosynthesis, Molybdopterin.
     
 0.466
SSO0999
ABC Transporter; Transport.
       0.444
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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