Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSO1024NADH-Ubiquinone/plastoquinone related; Similarity with hydrogenase-4 / formate hydrogenlyase / NADH-dehydrogenase; Energy Metabolism. (440 aa)    
Predicted Functional Partners:
hycG
Formate hydrogenlyase subunit 7 (hycG); Energy Metabolism.
 
 
 0.997
hycE
Formate hydrogenlyase subunit 5 (hycE); Energy Metabolism.
 
 0.997
hycD
Formate hydrogenlyase subunit 4 (hycD); Energy Metabolism.
 
 
 0.996
NuoL
NADH dehydrogenase subunit L (NuoL); Genes seems duplicated compared to other homologues; Energy Metabolism, Electron transport.
 
 
0.966
SSO1025
Conserved hypothetical protein.
 
  
 0.964
hycC
Formate hydrogenlyase subunit 3 (hycC); Energy Metabolism.
 
     0.949
NuoD
NADH dehydrogenase subunit D (NuoD); Energy Metabolism, Electron transport; Belongs to the complex I 49 kDa subunit family.
 
   0.794
NuoI
NADH dehydrogenase subunit I (NuoI); Energy Metabolism, Electron transport.
  
 
 0.794
NuoB
NADH dehydrogenase subunit B (NuoB); Energy Metabolism, Electron transport; Belongs to the complex I 20 kDa subunit family.
 
 
 
 0.779
SSO1020
Hypothetical protein.
       0.773
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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