STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO1336Second ORF in transposon ISC1904. (423 aa)    
Predicted Functional Partners:
SSO1335
First ORF in transposon ISC1904.
  
    0.786
SSO0008
Transposase, probably IS605-TnpB family; Cannot be named yet because only one copy exists and therfore the length is unknown.
  
     0.633
SSO3256
Second ORF in transposon ISC1316; ISC1316 is split by another IS element (SSO1317).
  
     0.610
SSO2123
First ORF in transposon ISC1316.
  
     0.608
SSO1682
Partial transposase in ISC1316.
  
     0.587
SSO1338
Permease, sugar transport protein, putative; Transport.
       0.505
SSO1475
Transposase ISC1476.
  
     0.416
SSO1681
Partial transposase in ISC1316.
  
     0.407
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.