STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsA-2-2Acetyl-CoA synthetase (acetate-CoA ligase) amino-end fragment. (acsA-2); Interrupted by transposase in ISC1316. Carboxy-end is SSO1340; Lipid metabolism. (287 aa)    
Predicted Functional Partners:
acsA-2
Acetyl-CoA synthetase (acetate-CoA ligase) carboxy-end fragment. (acsA-2); Interrupted by transposase in ISC1316. Amino-end is SSO1342; Lipid metabolism.
 
     0.967
acsA-4-2
Acetyl-CoA synthetase (acetate-CoA ligase) carboxy-end fragment (acsA-4); Possible frameshift with SSO2020 and SSO9518; Lipid metabolism.
 
     0.954
gltA
Citrate synthase; Energy Metabolism; Belongs to the citrate synthase family.
  
 
 0.671
fadD-1
Long-chain-fatty-acid--CoA ligase (fadD-1); Lipid metabolism.
 
 0.606
caiB
L-carnitine dehydratase, putative (caiB); Energy Metabolism.
     
 0.589
aceB/mas
Malate synthase, putative (aceB/mas); Energy Metabolism, Tri-Carboxylic Acid Cycle.
  
 
 0.560
acsA-1
Acetyl-CoA synthetase (acetate-CoA ligase) (acsA-1); Lipid metabolism.
 
     0.533
fadD-3
Long-chain-fatty-acid--CoA ligase (fadD-3); Lipid metabolism.
 
 
0.530
fadD-2
Long-chain-fatty-acid--CoA ligase (fadD-2); Lipid metabolism.
 
0.517
SSO1218
Energy Metabolism, Dehydrogenases.
  
 
 0.504
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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