STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpsA-1Thermostable carboxypeptidase (cpsA-1); Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids. (393 aa)    
Predicted Functional Partners:
SSO1356
Hypothetical protein.
       0.701
tldE
Zn-dependent protease, tldE protein homolog, putative (tldE); Proteases.
     
 0.612
SSO1354
Endoglucanase precursor; Energy Metabolism.
       0.547
SSO1357
Dolichyl-phosphate mannose synthase related protein; Cell Envelope, Surface polysaccharides and lipopolysaccharides.
       0.528
SSO1353
Hypothetical protein.
       0.440
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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