STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCConserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (148 aa)    
Predicted Functional Partners:
rpl13E
LSU ribosomal protein L13E (rpl13E); Homologous to APES024; Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL13 family.
      
 0.495
rpl14AB
LSU ribosomal protein L14AB (rpl14AB); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
      
 0.432
SSO2652
Transcriptional regulatory protein (Lrp/AsnC family); Transcription, RNA polymerase and transcription factors.
      
 0.421
SSO8193
First part of one of two inversely orientated ORFs in ISC1043; ISC1043 (SSO8193, SSO8194, SSO8195 and SSO1486) is disrupted by ISC1190 (SSO1484).
       0.412
SSO8194
Second part of one of two inversely orientated ORFs in ISC1043; ISC1043 (SSO8193, SSO8194, SSO8195 and SSO1486) is disrupted by ISC1190 (SSO1484).
       0.412
SSO8195
Third part of one of two inversely orientated ORFs in ISC1043; ISC1043 (SSO8193, SSO8194, SSO8195 and SSO1486) is disrupted by ISC1190 (SSO1484).
       0.412
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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