Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSO2015Protease, putative; Proteases. (385 aa)    
Predicted Functional Partners:
NuoC
NADH dehydrogenase subunit C (NuoC); Energy Metabolism, Electron transport.
  
   0.643
NuoI
NADH dehydrogenase subunit I (NuoI); Energy Metabolism, Electron transport.
  
 
 0.607
SSO2018
Ring oxydation complex/ phenylacetic acid degradation related protein; Cellular Processes, Detoxification.
       0.529
paaF-4
Enoyl CoA hydratase (paaF-4); Lipid metabolism; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.510
NuoD
NADH dehydrogenase subunit D (NuoD); Energy Metabolism, Electron transport; Belongs to the complex I 49 kDa subunit family.
  
   0.503
soxL-2
Rieske iron-sulfur protein-1 (soxL-2); Energy Metabolism.
 
 
   0.494
pcm
L-isoaspartyl protein carboxyl methyltransferase (pcm); Cellular Processes.
  
   0.487
NuoL
NADH dehydrogenase subunit L (NuoL); Genes seems duplicated compared to other homologues; Energy Metabolism, Electron transport.
 
   0.475
soxL-1
Rieske iron-sulfur protein-1 (soxL-1); Energy Metabolism.
 
 
   0.474
doxB
Heme bearing subunit I of the terminal oxidase (doxB); Energy Metabolism.
 
 
 
 0.469
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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