Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSO2137ABC transporter, ATP binding protein; Transport. (339 aa)    
Predicted Functional Partners:
SSO2135
Membrane conserved hypothetical protein; Similarity with Ta0870, APE2578; Cell Envelope, Membranes.
 
  
 0.980
SSO2138
Conserved hypothetical protein.
  
    0.838
SSO0051
Conserved hypothetical protein.
 
  
 0.638
SSO2134
Sugar transport related protein; Transport, Cell membrane transport.
   
   0.627
SSO3012
ABC transporter, ATP binding protein; Transport.
  
 0.616
SSO1318
Conserved hypothetical protein.
  
 
 0.570
SSO1936
Conserved hypothetical protein.
  
 
 0.570
dppD-3
Dipeptide ABC transporter ATP binding protein (dppD-3); Transport, Cell membrane transport.
     
0.535
dppD-1
Oligo/dipeptide transport, ATP binding protein (dppD-1); Transport, Cell membrane transport.
     
0.512
SSO2646
Conserved hypothetical protein; Putative ABC transporter. Similarity with TM1326,TM1304, APE2514, PH1848.
 
  
 0.504
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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