STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2212Hypothetical protein. (256 aa)    
Predicted Functional Partners:
rpoM-2
DNA-directed RNA polymerase, subunit M (rpoM-2); Transcription, RNA polymerase and transcription factors.
      
 0.870
SSO2211
Conserved hypothetical protein; Similar to AF0577.
       0.778
SSO2210
Hypothetical protein.
       0.693
rpoM-1
DNA-directed RNA polymerase, subunit M (rpoM-1); Possible in-frame shift with SSO5576. Similar to carboxy-end of RPOM_SULAC, but most other thermophilic genes are the same size; Transcription, RNA polymerase and transcription factors; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
      
 0.612
SSO0605
Zn finger protein, hypothetical; Similar to rpoM; Uncategorized.
      
 0.612
rpoM-like
DNA-directed RNA polymerase, putative subunit M (rpoM-like); Possible in-frame shift with SSO0291. Similar to amino-end of RPOM_SULAC; Transcription, RNA polymerase and transcription factors.
      
 0.612
SSO2209
Conserved hypothetical protein; Similar to Ta0565.
       0.453
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.