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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcDCation-efflux system membrane protein czcD homolog; Transport. (271 aa)    
Predicted Functional Partners:
SSO3073
Conserved hypothetical protein.
   
 0.765
trxB-3
Thioredoxin reductase (trxB-3); Pyrimidines.
 
   
 0.744
SSO2228
Transport protein, hypothetical; Putative Co/Zn/Cd cation transporter. Some similarity with aq_1073, aq_2073; Transport.
  
 
 0.741
pacS
Cation transporting ATPase (pacS); Transport.
 
  
 0.624
CadA
Copper-transporting ATPase; Transport.
  
  
 0.574
SSO3089
Hypothetical protein.
     
 0.515
merA
Mercuric reductase (Hg(II) reductase) (merA); Cellular Processes, Detoxification; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.501
metS
Methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.
 
   
 0.492
SSO3250
Conserved hypothetical protein.
 
 
 
 0.492
pdhD-1
Dihydrolipoamide dehydrogenase (pdhD-1); Energy Metabolism, Dehydrogenases; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.478
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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