Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SSO0287 | eiF2A | SSO0287 | SSO1050 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | 0.936 |
| SSO0287 | prf1 | SSO0287 | SSO2339 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | Eukaryotic-type peptide chain release factor (subunit 1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Belongs to the eukaryotic release factor 1 family. | 0.997 |
| SSO0287 | rpS13E | SSO0287 | SSO0408 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins. | 0.885 |
| SSO0287 | rpl15E | SSO0287 | SSO0742 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | LSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.872 |
| SSO0287 | rps17AB | SSO0287 | SSO0709 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.886 |
| SSO0287 | rps2AB | SSO0287 | SSO0067 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S2AB (rps2AB); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uS2 family. | 0.801 |
| SSO0287 | rps3AE | SSO0287 | SSO0746 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.924 |
| SSO0287 | rps4E | SSO0287 | SSO0705 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.919 |
| SSO0287 | rps6E | SSO0287 | SSO0411 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins. | 0.921 |
| SSO0287 | tuF-1 | SSO0287 | SSO0216 | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | Elongation factor 1-alpha (elongation factor tu) (EF-tu) (tuF-1); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.583 |
| eiF2A | SSO0287 | SSO1050 | SSO0287 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | RNase L inhibitor; Central Intermediary Metabolism, RNA modification. | 0.936 |
| eiF2A | prf1 | SSO1050 | SSO2339 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | Eukaryotic-type peptide chain release factor (subunit 1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Belongs to the eukaryotic release factor 1 family. | 0.914 |
| eiF2A | rpS13E | SSO1050 | SSO0408 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S13E (rpS13E); Close hits to several plant species' 40S ribosomal protein; Translation, Ribosomal Proteins. | 0.995 |
| eiF2A | rpl15E | SSO1050 | SSO0742 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | LSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.932 |
| eiF2A | rps17AB | SSO1050 | SSO0709 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.996 |
| eiF2A | rps2AB | SSO1050 | SSO0067 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S2AB (rps2AB); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uS2 family. | 0.988 |
| eiF2A | rps3AE | SSO1050 | SSO0746 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S3AE (rps3AE); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
| eiF2A | rps4E | SSO1050 | SSO0705 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.996 |
| eiF2A | rps6E | SSO1050 | SSO0411 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins. | 0.997 |
| eiF2A | tuF-1 | SSO1050 | SSO0216 | Translation initiation factor aif-2 (eiF2A); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. | Elongation factor 1-alpha (elongation factor tu) (EF-tu) (tuF-1); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.823 |
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