STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2386Conserved hypothetical protein. (616 aa)    
Predicted Functional Partners:
gspE-3
Type II secretion system protein, virB homolog (gspE-3); Protein E of general secretion pathway; type II traffic warden ATPase; Transport, Cell membrane transport.
  
  
 0.985
SSO3139
Hypothetical protein.
      
 0.870
SSO3140
Hypothetical protein.
      
 0.806
SSO3138
Hypothetical protein.
      
 0.803
SSO3141
Hypothetical protein.
      
 0.803
rnhB
Ribonuclease HII (rnhB); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.655
eif2B
Translation initiation factor 2, beta subunit (eif2B); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family.
       0.637
SSO2382
Conserved hypothetical protein; Best hit: PAB1715.
       0.637
SSO2383
Conserved hypothetical protein; High hit: PAB1716.
       0.637
SSO2385
GTP binding conserved hypothetical protein; Belongs to GTP1/OBG family; Uncategorized.
       0.637
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.