STRINGSTRING
SSO2445 protein (Sulfolobus solfataricus) - STRING interaction network
"SSO2445" - annotation not available in Sulfolobus solfataricus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2445annotation not available (147 aa)    
Predicted Functional Partners:
rtcA
RNA 3’-terminal phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (By similarity) (345 aa)
              0.673
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)); Belongs to the QueC family (464 aa)
           
  0.656
dpo4
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. It is involved in translesional synthesis (352 aa)
           
  0.643
rpl13E
50S ribosomal protein L13e; Homologous to APES024; Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL13 family (110 aa)
              0.629
SSO2103
annotation not available (112 aa)
           
  0.622
SSO1768
annotation not available (374 aa)
           
  0.622
SSO0980
annotation not available (354 aa)
           
  0.621
SSO1089
annotation not available (436 aa)
           
  0.620
SSO1088
annotation not available (209 aa)
           
  0.620
thrC-2
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine (396 aa)
           
  0.620
Your Current Organism:
Sulfolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Sulfolobus solfataricus, Sulfolobus solfataricus P2, Sulfolobus solfataricus str. P2, Sulfolobus solfataricus strain P2
Server load: low (10%) [HD]