STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2605ABC transporter, ABC1 family, putative; Transport. (496 aa)    
Predicted Functional Partners:
SSO1808
Ubiquinone/menaquinone biosynthesis methyltransferase; Cofactor Biosynthesis, Quinones.
    
 
 0.848
eiF5A
Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
    
 0.793
dfp
DNA/pantothenate metabolism flavoprotein (dfp); Cofactor Biosynthesis, Panthenate.
 
  
 0.601
phrB
Deoxyribodipyrimidine photolyase (DNA photolyase) (photoreactivating enzyme). (phrB); Replication and Repair; Belongs to the DNA photolyase family.
 
   
 0.499
pcm
L-isoaspartyl protein carboxyl methyltransferase (pcm); Cellular Processes.
 
  
 0.497
SSO2606
Hypothetical protein.
       0.479
HemB
Delta-aminolevulinic acid dehydratase; Cofactor Biosynthesis; Belongs to the ALAD family.
     
 0.477
ubiX
3-octaprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
 0.468
soxC-like
Quinol oxidase (SoxABC), cytochrome B subunit, putative (soxC-like); Energy Metabolism, Electron transport.
 
  
 0.433
pyrE
Orotate phosphoribosyltransferase (OPRT) (pyrE); Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
 
 
 0.419
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.