STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxL-1Rieske iron-sulfur protein-1 (soxL-1); Energy Metabolism. (324 aa)    
Predicted Functional Partners:
soxC-2
Quinol oxidase (SoxABC), cytochrome B subunit (soxC); Energy Metabolism, Electron transport.
 
 0.986
soxC-like
Quinol oxidase (SoxABC), cytochrome B subunit, putative (soxC-like); Energy Metabolism, Electron transport.
 
 0.983
soxG
Quinol oxidase-2, cytochrome b (soxG); Energy Metabolism, Electron transport.
 
 0.973
NuoI
NADH dehydrogenase subunit I (NuoI); Energy Metabolism, Electron transport.
  
 
 0.953
NuoD
NADH dehydrogenase subunit D (NuoD); Energy Metabolism, Electron transport; Belongs to the complex I 49 kDa subunit family.
  
 
 0.951
NuoC
NADH dehydrogenase subunit C (NuoC); Energy Metabolism, Electron transport.
  
 
 0.937
soxB
Quinol oxidase (SoxABC), cytochrome aa3 subunit (soxB); Energy Metabolism, Electron transport; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.900
doxB
Heme bearing subunit I of the terminal oxidase (doxB); Energy Metabolism.
 
 
 0.892
sdhB
Succinate dehydrogenase subunit B (sdhB); Iron-sulfur subunit B; Energy Metabolism, Electron transport.
 
 
 0.889
soxA
Quinol oxidase (SoxABC), subunit II (soxA); Energy Metabolism, Electron transport.
  
 
 0.888
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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