Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO2822 | fdhD | SSO2822 | SSO2821 | Hypothetical protein. | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.845 |
SSO2822 | fdhF-2 | SSO2822 | SSO2824 | Hypothetical protein. | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | 0.847 |
SSO2822 | ppsA-2 | SSO2822 | SSO2820 | Hypothetical protein. | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | 0.592 |
SSO2829 | ppsA-2 | SSO2829 | SSO2820 | Conserved hypothetical protein; Putative membrane transporter. | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | 0.512 |
SSO2829 | pyK | SSO2829 | SSO0981 | Conserved hypothetical protein; Putative membrane transporter. | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | 0.608 |
fdhD | SSO2822 | SSO2821 | SSO2822 | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Hypothetical protein. | 0.845 |
fdhD | fdhF-2 | SSO2821 | SSO2824 | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | 0.928 |
fdhD | ppsA-2 | SSO2821 | SSO2820 | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | 0.592 |
fdhF-2 | SSO2822 | SSO2824 | SSO2822 | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | Hypothetical protein. | 0.847 |
fdhF-2 | fdhD | SSO2824 | SSO2821 | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.928 |
fdhF-2 | ppsA-2 | SSO2824 | SSO2820 | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | 0.592 |
ppsA-2 | SSO2822 | SSO2820 | SSO2822 | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | Hypothetical protein. | 0.592 |
ppsA-2 | SSO2829 | SSO2820 | SSO2829 | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | Conserved hypothetical protein; Putative membrane transporter. | 0.512 |
ppsA-2 | fdhD | SSO2820 | SSO2821 | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | FDHD protein homolog (fdhD); Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.592 |
ppsA-2 | fdhF-2 | SSO2820 | SSO2824 | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | Formate dehydrogenase Alpha subunit (fdhF-2); Energy Metabolism. | 0.592 |
ppsA-2 | pyK | SSO2820 | SSO0981 | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | 0.798 |
pyK | SSO2829 | SSO0981 | SSO2829 | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | Conserved hypothetical protein; Putative membrane transporter. | 0.608 |
pyK | ppsA-2 | SSO0981 | SSO2820 | Pyruvate kinase (pyK); Energy Metabolism, Glycolysis; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate synthase (ppsA-2); Energy Metabolism, Glycolysis. | 0.798 |