Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SSO0535 | SSO2872 | SSO0535 | SSO2872 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Conserved hypothetical protein. | 0.928 |
SSO0535 | acaB-10 | SSO0535 | SSO3113 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-10); Lipid metabolism. | 0.959 |
SSO0535 | acaB-2 | SSO0535 | SSO2061 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-2); Lipid metabolism. | 0.993 |
SSO0535 | acaB-3 | SSO0535 | SSO2062 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-3); Lipid metabolism. | 0.993 |
SSO0535 | acaB-6 | SSO0535 | SSO2508 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-6); Lipid metabolism. | 0.959 |
SSO0535 | acaB-7 | SSO0535 | SSO2625 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-7); Lipid metabolism. | 0.994 |
SSO0535 | acaB-8 | SSO0535 | SSO2697 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-8); Lipid metabolism. | 0.993 |
SSO0535 | acaB-9 | SSO0535 | SSO2874 | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-9); Lipid metabolism. | 0.994 |
SSO2872 | SSO0535 | SSO2872 | SSO0535 | Conserved hypothetical protein. | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | 0.928 |
SSO2872 | acaB-10 | SSO2872 | SSO3113 | Conserved hypothetical protein. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-10); Lipid metabolism. | 0.826 |
SSO2872 | acaB-2 | SSO2872 | SSO2061 | Conserved hypothetical protein. | Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-2); Lipid metabolism. | 0.860 |
SSO2872 | acaB-3 | SSO2872 | SSO2062 | Conserved hypothetical protein. | Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-3); Lipid metabolism. | 0.861 |
SSO2872 | acaB-6 | SSO2872 | SSO2508 | Conserved hypothetical protein. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-6); Lipid metabolism. | 0.830 |
SSO2872 | acaB-7 | SSO2872 | SSO2625 | Conserved hypothetical protein. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-7); Lipid metabolism. | 0.803 |
SSO2872 | acaB-8 | SSO2872 | SSO2697 | Conserved hypothetical protein. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-8); Lipid metabolism. | 0.760 |
SSO2872 | acaB-9 | SSO2872 | SSO2874 | Conserved hypothetical protein. | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-9); Lipid metabolism. | 0.964 |
SSO2872 | alkK-4 | SSO2872 | SSO2875 | Conserved hypothetical protein. | Medium-chain-fatty-acid--CoA ligase (alkK-4); Lipid metabolism. | 0.735 |
SSO2872 | hdb-2 | SSO2872 | SSO2871 | Conserved hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase (hdb-2); Lipid metabolism. | 0.806 |
acaB-10 | SSO0535 | SSO3113 | SSO0535 | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-10); Lipid metabolism. | Acyl carrier protein synthase; Lipid metabolism; Belongs to the thiolase-like superfamily. UPF0219 family. | 0.959 |
acaB-10 | SSO2872 | SSO3113 | SSO2872 | Acetyl-CoA c-acetyltransferase (acetoacetyl-CoA thiolase) (acaB-10); Lipid metabolism. | Conserved hypothetical protein. | 0.826 |
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