STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO3006Alpha-mannosidase; Central Intermediary Metabolism, Cytoplasmic polysaccharides. (968 aa)    
Predicted Functional Partners:
fabG-9
3-oxoacyl-(acyl carrier protein) reductase (fabG-9); Dehydrogenase/reductase family; Lipid metabolism.
  
  
 0.954
gabT-1
4-aminobutyrate aminotransferase (gabT-1); Amino Acid Biosynthesis; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.877
lacS
Beta-glycosidase (lacS); Central Intermediary Metabolism, Cytoplasmic polysaccharides.
  
  
 0.822
SSO3007
Conserved hypothetical protein.
 
   
 0.789
gusB
Beta-glucuronidase (gusB); Glycosyl hydrolase family 2; Central Intermediary Metabolism, Cytoplasmic polysaccharides.
 
   
 0.741
SSO3008
Dehydrogenase, putative; Energy Metabolism, Dehydrogenases.
 
  
 0.645
treX-like
Glycogen debranching enzyme, hypothetical (treX-like); Energy Metabolism, Sugar metabolism.
  
    0.622
SSO2432
Conserved hypothetical protein; Similarity with APE2223, PAB1788, AE1419, PH0980.
   
    0.585
SSO3029
Hypothetical protein.
 
     0.490
SSO3032
Beta-xylosidase; Glycosyl hydrolase family 3; Central Intermediary Metabolism, Cytoplasmic polysaccharides.
 
  
 0.481
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.