STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galSRaffinose synthase (Sip1 seed imbibition) protein homolog; Involved in the degradation of various alpha-linked galactosides such as raffinose, stachyose and melibiose. (649 aa)    
Predicted Functional Partners:
SSO2406
Conserved hypothetical protein.
      
 0.856
SSO2552
Conserved hypothetical protein; Putative Peptide N4 (N acetyl beta glucosaminyl)asparagine amidase. (EC 3.5.1.52) (glycoamidase).
  
     0.640
taw1
Conserved hypothetical protein; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).
  
     0.539
SSO2228
Transport protein, hypothetical; Putative Co/Zn/Cd cation transporter. Some similarity with aq_1073, aq_2073; Transport.
  
     0.508
top6B
DNA topoisomerase VI subunit B (top6B); Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
  
     0.486
SSO2712
Hypothetical protein.
  
     0.482
SSO1172
Conserved hypothetical protein.
  
     0.478
SSO1967
Third ORF in transposon ISC1913; ISC1913 is split by ISC1190 (SSO1966) the first ORF is SSO1964 and the second is SSO9368.
  
     0.457
SSO1916
Second ORF in transposon ISC1913.
  
     0.447
SSO0797
Orf in partial transposon ISC1913.
  
     0.440
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.