STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF1BTranslation elongation factor EF-1, beta subunit (EF1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (91 aa)    
Predicted Functional Partners:
tuF-1
Elongation factor 1-alpha (elongation factor tu) (EF-tu) (tuF-1); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 0.998
rps3AB
SSU ribosomal protein S3AB (rps3AB); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 
 0.993
rpl15E
LSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family.
  
   0.991
rpl14AB
LSU ribosomal protein L14AB (rpl14AB); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
  
 
 0.990
rpl21E
LSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 
 0.990
rps17E
SSU ribosomal protein S17E (rps17E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS17 family.
 
   0.989
rpl24E
LSU ribosomal protein L24E (rpl24E); Binds to the 23S rRNA.
   
   0.988
rpl29AB
LSU ribosomal protein L29AB (rpl29AB); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.986
rps17AB
SSU ribosomal protein S17AB (rps17AB); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.985
rps6E
SSU ribosomal protein S6E (rps6E); Hit to one end of protein, other domains not recognized; Translation, Ribosomal Proteins.
  
  
 0.982
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.